Module org.phenopackets.phenopackettools.builder

Package org.phenopackets.phenopackettools.builder.builders

Class PersonBuilder

java.lang.Object

org.phenopackets.phenopackettools.builder.builders.PersonBuilder

public class PersonBuilder
extends Object

Method Summary

Modifier and Type	Method	Description
PersonBuilder	affected()
org.phenopackets.schema.v2.core.Pedigree.Person	build()
static PersonBuilder	builder(String familyId, String individualId, String paternalId, String maternalId)
static PersonBuilder	builderWithParentsAsFounders(String familyId, String individualId)	Founders are persons in a PED file whose parents are not included.
PersonBuilder	female()
PersonBuilder	male()
PersonBuilder	missing()
PersonBuilder	unaffected()
PersonBuilder	unknownSex()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Method Details

male

public PersonBuilder male()

female

public PersonBuilder female()

unknownSex

public PersonBuilder unknownSex()

affected

public PersonBuilder affected()

unaffected

public PersonBuilder unaffected()

missing

public PersonBuilder missing()

builder

public static PersonBuilder builder(String familyId,
 String individualId,
 String paternalId,
 String maternalId)

builderWithParentsAsFounders

public static PersonBuilder builderWithParentsAsFounders(String familyId,
 String individualId)

Founders are persons in a PED file whose parents are not included. These parents are indicated by "0". This function creates a personBuilder with prepopulated father/mother ids of "0"

build

public org.phenopackets.schema.v2.core.Pedigree.Person build()