Module org.phenopackets.phenopackettools.builder

Package org.phenopackets.phenopackettools.builder.builders

Class DiseaseBuilder

java.lang.Object

org.phenopackets.phenopackettools.builder.builders.DiseaseBuilder

public class DiseaseBuilder
extends Object

Method Summary

Modifier and Type	Method	Description
DiseaseBuilder	addClinicalTnmFinding(org.phenopackets.schema.v2.core.OntologyClass tnmFinding)
DiseaseBuilder	addDiseaseStage(org.phenopackets.schema.v2.core.OntologyClass stage)
org.phenopackets.schema.v2.core.Disease	build()
static DiseaseBuilder	builder(String id, String label)
static DiseaseBuilder	builder(org.phenopackets.schema.v2.core.OntologyClass term)
DiseaseBuilder	excluded()
DiseaseBuilder	laterality(org.phenopackets.schema.v2.core.OntologyClass laterality)
static org.phenopackets.schema.v2.core.Disease	of(String id, String label)
static org.phenopackets.schema.v2.core.Disease	of(org.phenopackets.schema.v2.core.OntologyClass term)
DiseaseBuilder	onset(org.phenopackets.schema.v2.core.TimeElement timeElement)
DiseaseBuilder	primarySite(org.phenopackets.schema.v2.core.OntologyClass site)
DiseaseBuilder	resolution(org.phenopackets.schema.v2.core.TimeElement timeElement)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Method Details

of

public static org.phenopackets.schema.v2.core.Disease of(org.phenopackets.schema.v2.core.OntologyClass term)

of

public static org.phenopackets.schema.v2.core.Disease of(String id,
 String label)

builder

public static DiseaseBuilder builder(org.phenopackets.schema.v2.core.OntologyClass term)

builder

public static DiseaseBuilder builder(String id,
 String label)

excluded

public DiseaseBuilder excluded()

onset

public DiseaseBuilder onset(org.phenopackets.schema.v2.core.TimeElement timeElement)

resolution

public DiseaseBuilder resolution(org.phenopackets.schema.v2.core.TimeElement timeElement)

addDiseaseStage

public DiseaseBuilder addDiseaseStage(org.phenopackets.schema.v2.core.OntologyClass stage)

addClinicalTnmFinding

public DiseaseBuilder addClinicalTnmFinding(org.phenopackets.schema.v2.core.OntologyClass tnmFinding)

primarySite

public DiseaseBuilder primarySite(org.phenopackets.schema.v2.core.OntologyClass site)

laterality

public DiseaseBuilder laterality(org.phenopackets.schema.v2.core.OntologyClass laterality)

build

public org.phenopackets.schema.v2.core.Disease build()